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Dr. Toru M. Nakamura
Associate Professor

Research Interests:
Our laboratory is interested in understanding how checkpoint and DNA repair proteins contribute to maintenance of telomeres, the natural ends of linear eukaryotic chromosomes. Proper maintenance of telomeres is crucial for stable inheritance of the genome. Various checkpoint and DNA repair proteins, including evolutionarily highly conserved checkpoint kinases Tel1 (ATM) and Rad3 (ATR), play important roles in stable maintenance of telomeres. However, mechanistic roles for various checkpoint and DNA repair proteins in telomere maintenance have not been fully established. Deregulation of telomere maintenance mechanisms has been found to be a key event in tumorigenesis, thus mechanistic insights on how various proteins collaborate to generate functional telomeres might lead to effective methods for preventing cancer.

Tel1ATM and Rad3ATR promote telomere protection and telomerase recruitment.
(A) A model for telomere dysfunction caused by simultaneous loss of Tel1ATM and Rad3ATR in fission yeast. The "open" or accessible state of the telomere during late S-phase, which allows recruitment of Rad3-Rad26 and telomerase, is depicted.
(B) A proposed regulatory loop of Tel1ATM/Rad3ATR and the Pot1 sub-complex, required for telomere maintenance. The Pot1 sub-complex subunit Ccq1 is involved in telomere capping and telomerase recruitment, and its recruitment is redundantly promoted by Tel1ATM and Rad3ATR kinases. (Moser et al. 2009)

We use fission yeast Schizosaccharomyces pombe as a model system. Advantages of S. pombe include well-characterized DNA damage responses with high structural and functional conservation to mammalian cells, and amenability to genetic, biochemical and cytological studies. In addition, the ability of fission yeast to bypass the need for functional telomere maintenance mechanisms by circularizing all chromosomes provides flexibility, not available in any other organisms, in manipulating telomere related genes without being hindered by cell lethality. In fact, S. pombe cells lacking telomerase, as well as cells lacking both Tel1ATM and Rad3ATR kinases survive telomere maintenance defects by circularizing all three chromosomes.

We have demonstrated by quantitative chromatin immunoprecipitation assays that the leading strand DNA polymerase (Pol ε) arrives to replicating telomeres significantly earlier than the lagging strand DNA polymerases (Pol α and Pol δ), and replicating telomeres strongly recruit Replication Protein A (RPA) and Rad3-Rad26 (ATR-ATRIP) complexes in fission yeast. We have also established the cell-cycle-regulated recruitment timing for MCM, Mre11-Rad50-Nbs1 (MRN) complex, Trt1 (TERT, catalytic subunit of telomerase), and telomere capping proteins (Pot1 and Stn1). In addition, we have established that Tel1ATM and Rad3ATR kinases are redundantly required to promote telomere protection and telomerase recruitment by promoting efficient recruitment of the telomere capping complex subunit Ccq1 to telomeres.


A model of telomere length regulation in fission yeast. (Moser et al. 2011)

We have also discovered recently that Tel1ATM/Rad3ATR-dependent phosphorylation of Ccq1 on Thr93 is essential for telomerase association with telomeres, and that the 14-3-3-like domain of the telomerase regulatory subunit Est1 specifically recognizes and binds the phosphorylated Thr93 of Ccq1. Phosphorylation of Ccq1 is negatively regulated by the telomerase inhibitors Taz1, Rap1 and Poz1, and telomere elongation and increased telomerase association with telomeres found in rap1Δ cells are dependent on Ccq1 Thr93 phosphorylation. On the other hand, Ccq1 Thr93 phosphorylation is also increased as telomeres shorten in telomerase mutant cells. Taken together, we thus uncovered the Tel1ATM/Rad3ATR-dependent Ccq1-Est1 interaction as a critical regulatory mechanism that ensures stable maintenance of telomeres in fission yeast cells.

 

Selected Publications

Miyagawa, K., Low, R.S., Santosa, V., Tsuji, H., Moser, B.A., Fujisawa, S., Harland, J., Raguimova, O.N., Go, A., Ueno, M., Matsuyama, A., Yoshida, M., Nakamura, T.M.* and Tanaka, K.* (2014) (*Co-corresponding authors) SUMOylation regulates telomere length by targeting Tpz1TPP1 to modulate shelterin-Stn1 interaction in fission yeast. Proc. Natl. Acad. Sci. U.S.A. In press.

Chang, Y.-T., Moser, B.A. and Nakamura, T.M. (2013) Fission yeast shelterin regulates DNA polymerases and Rad3ATR kinase to limit telomere extension. PLoS Genet. 9(11): e1003936.

Moser, B.A., Chang, Y.-T., Kosti, J. and Nakamura, T.M. (2011) Tel1ATM and Rad3ATR kinases promote Ccq1-Est1 interaction to maintain telomeres in fission yeast. Nat. Struct. Mol. Biol. 18: 1408-1413. [evaluated by Faculty of 1000]

Carneiro, T., Khair, L., Reis, C.C., Borges, V., Moser, B.A., Nakamura, T.M. and Ferreira, M.G. (2010) Telomeres avoid end detection by severing the checkpoint signal transduction pathway. Nature 467(7312): 228-232. [evaluated by Faculty of 1000]

 

Contact

Email: nakamut@uic.edu
Site: View Lab Website
Office: 312-996-1988
Lab: 312-413-5084

Publications

View Publications on PubMed

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