Biomedical Informatics Core
Index
Core Description
Services Provided
Core Members
Bio Informatics Courses in College of Engineering
Biomedical and Health Informatics Courses Offered in the College of Applied Health Sciences
Biomedical and Health Informatics Colloquia
Informatics Resources and links
For Questions or Consultation Services
Biomedical Informatics Consultation Available
CORE DESCRIPTION
The Biomedical Informatics (BI) Core provides the informatics infrastructure, clinical research data resources, and informatics services required in the translation of research from bench to bedside to community and back again.
The BI Core is focusing on three aims to address specific barriers and opportunities in clinical and translation research. The barriers and transformations offered at BI core are listed below in detail.
Barrier / Opportunity |
Transformation |
| Technical and procedural barriers complicate research workflow and administrative tasks and limit access to existing resources. | We are creating a biomedical informatics infrastructure (BII) that provides research workflow management tools, simplifies administrative tasks, and automates processes to ensure compliance with required procedures and to support evaluation and tracking. |
| Limited access to a wealth of clinical data impedes both large-scale and small-scale informatics research and limits the utility of the information in non-informatics applications. | We are developing clinical research data resources and a multi-purpose,user-friendly interface to support clinical and translational research. |
| Unfamiliarity with informatics technology and techniques prevents investigators from utilizing these tools in research, and the lack of a centralized informatics service makes it difficult for investigators to locate informatics assistance. | We provide formal and informal education and training opportunities to familiarize the clinical and translational research community with the BII and the potential for informatics in collaborative research.We also provide consultative and application development services to promote the use of informatics in research. |
Through the application of existing informatics resources, the development of new resources, and the implementation of novel approaches, the BI Core is implementing an innovative program that promotes the efficient, effective multi-directional flow of information among basic, animal, human, and public health researchers while minimizing the effects of traditional barriers that form research silos. This transformative approach is providing a set of user-friendly informatics tools and services that are supporting CCTS operations, UIC and CCTS-affiliate administrators, and clinical and translational research activities.
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Services provided
Staff of the BI Core assist investigators and CCTS personnel with the development of databases, clinical decision support tools, clinical informatics, biomedical informatics, and web-based tools. BI faculty and staff have expertise in research database design, clinical informatics, software development, cyber environment development, computational genomics and proteomics.
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CORE MEMBERS
Denise M. Hynes, PhD, RN, Director
Dr. Hynes oversees programs within the BI Core. In addition, she is responsible for working with CCTS leadership and other CCTS core and program directors to coordinate the activities of the Biomedical Informatics Core with the broader CCTS program. Dr. Hynes is Professor(Visiting) in the Department of Medicine, College of Medicine and Research Scientist in the Department of Health Policy Administration in the School of Public Health. She also maintains a joint appointment as a Research Career Scientist in the Department of Veterans Affairs, currently based at the Edward Hines Jr. VA Hospital. Dr. Hynes has developed and utilized databases and informatics throughout her health science research career. In her ten years as director of the VA Information Resource Center (VIReC), she has overseen the development of a knowledge management system on databases in the VA, development of a research data warehouse that integrates VA and Medicare data, creation of a database and informatics helpdesk and consultation service, and the establishment of educational programs in clinical informatics. In addition to directing operations for the BI Core she will direct the Core’s Clinical Research Data Resources program.
Ian Brooks, PhD, Associate Director for Infrastructure Development
Dr. Brooks serves as the Associate Director for Infrastructure Development and coordinates the development, implementation, and maintenance of the BI infrastructure. Dr. Brooks directs the Health Sciences Group at National Center for Supercomputing Applications (NCSA) where he is currently working to adapt the common computational infrastructures NCSA is building to the biomedical and public health fields. These projects include developing cyber environments for infectious disease surveillance, modeling, and response; endemic disease control; and patient safety. He has recently been working with CDC to develop publicly accessible web resources to map the global risk of malaria and other endemic diseases.
Annette Valenta, DrPH, Associate Director for Informatics Education and Consulting Services
Annette Valenta serves as the Associate Director for Informatics Education and Consulting Services. She coordinates the education programs and consultative services of the Biomedical Informatics Core. Dr. Valenta is the Associate Dean for Health Informatics and Technology in the College of Applied Health Sciences. Under her direction, the program developed the nation’s first online-only advanced degrees and certificates in health informatics. She also developed the College of Applied Health Sciences’ two joint-degree programs: the MS in health informatics paired with either an MS in nursing administration or a doctor of pharmacy. Her recent research involves technology evaluation, and she has expanded the research and educational programs of the UIC Virtual Reality in Medicine Laboratory.
Jie Liang, PhD, Lead Biomedical Informatician
Jie Liang serves as the Lead Biomedical Informatician for the BI Core. He provides expertise in computational genomics and proteomics and will facilitate collaborations between informatics experts and clinical and translational researchers. He founded the Bioinformatics MS/PHD Program at UIC in 2003 and currently leads this very successful program of 27 PhD students. He has extensive experience in formulating and developing computational software that addresses the needs of biomedical researchers including the widely used CastP web server for protein surface analysis(>3,000 users worldwide).
Andrew Boyd, MD, Lead Clinical Liaison for Informatics
Andrew Boyd serves as the Lead Clinical Liaison for Informatics for the BI Core. He provides expertise in clinical data resources and will facilitate consultative services and collaborations between informatics experts and clinical and translational researchers. Dr. Boyd is a Research Assistant Professor in both the College of Medicine in the Department of Medical Education and the College of Applied Health Sciences in the Department of Biomedical and Health Information Sciences. He assisted with the development of the University of Michigan’s NIH-supported Honest Broker System, a federated clinical research system that integrated diverse clinical and research resources for centralized accessibility.
Andrew Wadsworth, PhD, Research Scientist and human-computer interface expert
Andrew Wadsworth a Research Scientist and human-computer interface expert at NCSA, is working with the BII development team to ensure fidelity of the system to these user-oriented design principles, and he will oversee the incorporation of user-oriented design principles in other research-driven application development projects in future years. Dr. Wadsworth has led technology development teams at the University of Illinois and served as a consultant on multinational e-Learning projects. He also founded the Web Technology Group, a multimedia development team of over forty specialists involved in developing user-friendly Web-based courses and multimedia-based distance education programs.
Informatics Resources and Links
CTSA Resources for Researchers
NIH National Centers for Biomedical Computing
Department of Veterans Affairs Information Resource Center (VIReC)
For Questions or Consultation Services
For more details about the services provided by the CCTS Biomedical Informatics Core or to request a consultation, please click the icon below for the application for services. This is a Word document. Please save it and send it via e-mail to Irene Ziaya , Investigator Interface Coordinator by Email at iziaya1@uic.edu or by phone at 312-413-7316.
CCTS Services Available – Biomedical Informatics Consultation
The Biomedical Informatics Core of the Center for Clinical and Translational Science (CCTS) offers consultative services to all clinical and translational investigators in the following informatics aspects of their studies. Services include:
Database building
Data manipulation
Classification systems (ICD-9, CPT, Genebank, GO)
Data sharing plan
Other health informatics
Computational biology
Bioinformatics
Systems biology
Consultation is available by appointment. To schedule a consultation please visit www.ccts.uic.edu/BI . Any questions? Contact iziaya1@uic.edu or call 312 413-7316.
Annette L. Valenta, DrPH
Associate Director, BI Core
Education and Consulting Services
